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Technical Notes |
Shorter notes on technical subjects |
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TN-2016-03:
Integrated Michaelis-Menten equation in DynaFit. 3. Application to HIV protease
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Determine substrate kinetic constants for the HIV protease by a global fit of combined enzymatic progress curves.
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TN-2016-02:
Integrated Michaelis-Menten equation in DynaFit. 2. Application to EGFR protein kinase
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Determine substrate kinetic constants for 5alpha-ketosteroid reductase from a single enzymatic progress curve.
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TN-2016-01:
Integrated Michaelis-Menten equation in DynaFit. 1. Application to EGFR protein kinase
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A step-by-step instructions and associated data file:
Determine substrate kinetic constants for a series of EGFR substrates.
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TN-2015-06:
Time-dependent inhibition of 5alpha-steroid reductase
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PDF (28 pages). A step-by-step DynaFit tutorial: Determination of "slow, tight"
enzyme inhibition mechanism and the best-fit values of rate and equilibrium constants..
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TN-2015-05:
Determination of substrate kinetic parameters from progress curve data
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PDF (23 pages). A step-by-step DynaFit tutorial: Determination of Km
and kcat from a single well chosen enzymatic progress curve.
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TN-2015-04:
An algebraic model for the kinetics of covalent enzyme inhibition at low substrate concentrations
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PDF (29 pages). A preprint (Analytical Biochemistry)
describing a novel mathematical model for the kinetics of covalent enzyme inhibition.
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TN-2015-03:
King-Altman method in DynaFit
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PDF (7 pages). Illustrates the use of the King-Altman method in the DynaFit software package.
The software now derives no only rate constants but also "kinetic constants" such as Km
and kcat.
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TN-2015-02:
Automated determination of kinact and Ki for covalent inhibition
using the Omnia assay
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PDF (117 pages). Accompaniment to a published report [Schwartz et al. (2014) Proc. Natl.
Acad. Sci. USA 111, 173–178] on covalent inhibition the EGFR kinase.
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TN-2015-01:
History, variants and usage of the "Morrison equation" in enzyme inhibition kinetics
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PDF (18 pages). A brief summary of various historical variants of
the "Morrison equation" for initial rates of enzyme reactions under
the conditions of tight-binding inhibition.
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www.biokin.com/publications/technotes/index.html Thu May 16 16:21:32 2024 |